GEOS
FlowSolverBase.hpp
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15 
20 #ifndef GEOS_PHYSICSSOLVERS_FINITEVOLUME_FLOWSOLVERBASE_HPP_
21 #define GEOS_PHYSICSSOLVERS_FINITEVOLUME_FLOWSOLVERBASE_HPP_
22 
24 #include "common/Units.hpp"
27 
28 namespace geos
29 {
30 
38 {
39  template< typename VIEWTYPE >
41 
42 public:
43 
45  static string coupledSolverAttributePrefix() { return "flow"; }
46 
52  FlowSolverBase( const string & name,
53  Group * const parent );
54 
55 
57  FlowSolverBase() = delete;
58 
60  FlowSolverBase( FlowSolverBase const & ) = delete;
61 
63  FlowSolverBase( FlowSolverBase && ) = default;
64 
66  FlowSolverBase & operator=( FlowSolverBase const & ) = delete;
67 
70 
71  virtual void registerDataOnMesh( Group & MeshBodies ) override;
72 
74  {
75  // misc inputs
76  static constexpr char const * isThermalString() { return "isThermal"; }
77  static constexpr char const * inputTemperatureString() { return "temperature"; }
78  static constexpr char const * allowNegativePressureString() { return "allowNegativePressure"; }
79  static constexpr char const * maxAbsolutePresChangeString() { return "maxAbsolutePressureChange"; }
80  static constexpr char const * maxSequentialPresChangeString() { return "maxSequentialPressureChange"; }
81  static constexpr char const * maxSequentialTempChangeString() { return "maxSequentialTemperatureChange"; }
82 
83  static constexpr char const * fluidNamesString() { return "fluidNames"; }
84  static constexpr char const * solidNamesString() { return "solidNames"; }
85  static constexpr char const * permeabilityNamesString() { return "permeabilityNames"; }
86  static constexpr char const * solidInternalEnergyNamesString() { return "solidInternalEnergyNames"; }
87  static constexpr char const * thermalConductivityNamesString() { return "thermalConductivityNames"; }
88  };
89 
95  void prepareStencilWeights( DomainPartition & domain ) const;
96 
102  void updateStencilWeights( DomainPartition & domain ) const;
103 
104  void enableFixedStressPoromechanicsUpdate() { m_isFixedStressPoromechanicsUpdate = true; }
105 
106  void enableJumpStabilization() { m_isJumpStabilized = true; }
107 
108  virtual void updatePorosityAndPermeability( CellElementSubRegion & subRegion ) const;
109 
110  virtual void updatePorosityAndPermeability( SurfaceElementSubRegion & subRegion ) const;
111 
116  virtual void saveSequentialIterationState( DomainPartition & domain ) override;
117 
118  integer & isThermal() { return m_isThermal; }
119 
123  virtual units::Unit getMassUnit() const { return units::Unit::Mass; }
124 
129 
135  void setKeepVariablesConstantDuringInitStep( bool const keepVariablesConstantDuringInitStep )
136  { m_keepVariablesConstantDuringInitStep = keepVariablesConstantDuringInitStep; }
137 
138  virtual bool checkSequentialSolutionIncrements( DomainPartition & domain ) const override;
139 
140  void enableLaggingFractureStencilWeightsUpdate(){ m_isLaggingFractureStencilWeightsUpdate = 1; };
141 
142  real64 sumAquiferFluxes( BoundaryStencil const & stencil,
143  AquiferBoundaryCondition::KernelWrapper const & aquiferBCWrapper,
144  ElementViewConst< arrayView1d< real64 const > > const & pres,
145  ElementViewConst< arrayView1d< real64 const > > const & presOld,
146  ElementViewConst< arrayView1d< real64 const > > const & gravCoef,
147  real64 const & timeAtBeginningOfStep,
148  real64 const & dt );
149 
166  virtual void assembleHydrofracFluxTerms( real64 const time_n,
167  real64 const dt,
168  DomainPartition const & domain,
169  DofManager const & dofManager,
170  CRSMatrixView< real64, globalIndex const > const & localMatrix,
171  arrayView1d< real64 > const & localRhs,
173  stdMap< string, localIndex > const * const dR_dAperOffsets )
174  {
175  GEOS_UNUSED_VAR ( time_n, dt, domain, dofManager, localMatrix, localRhs, dR_dAper, dR_dAperOffsets );
176  GEOS_ERROR( "Poroelastic fluxes with conforming fractures not yet implemented." );
177  }
178 
179  void initializeState( DomainPartition & domain );
180 
181  virtual void initializeFluidState( MeshLevel & mesh, string_array const & regionNames ) { GEOS_UNUSED_VAR( mesh, regionNames ); }
182 
183  virtual void initializeThermalState( MeshLevel & mesh, string_array const & regionNames ) { GEOS_UNUSED_VAR( mesh, regionNames ); }
184 
192  void findMinMaxElevationInEquilibriumTarget( DomainPartition & domain, // cannot be const...
193  stdMap< string, localIndex > const & equilNameToEquilId,
194  arrayView1d< real64 > const & maxElevation,
195  arrayView1d< real64 > const & minElevation ) const;
196 
206  real64 const & dt,
207  DomainPartition & domain, // cannot be const...
208  stdMap< string, localIndex > const & bcNameToBcId,
209  arrayView1d< globalIndex > const & bcAllSetsSize ) const;
210 
211  integer numberOfDofsPerCell() const { return m_numDofPerCell; }
212 
219  void applyDeltaVolume( ElementSubRegionBase & subRegion ) const;
220 
221 protected:
222 
232  template< typename OBJECT_TYPE >
233  void applyFieldValue( real64 const & time_n,
234  real64 const & dt,
235  MeshLevel & mesh,
236  char const logMessage[],
237  string const fieldKey,
238  string const boundaryFieldKey ) const;
239 
249  virtual void saveAquiferConvergedState( real64 const & time,
250  real64 const & dt,
251  DomainPartition & domain );
252 
257  virtual void saveConvergedState( ElementSubRegionBase & subRegion ) const;
258 
263  virtual void validatePoreVolumes( DomainPartition const & domain ) const;
264 
265  virtual void precomputeData( MeshLevel & mesh,
266  string_array const & regionNames );
267 
268  virtual void initializePreSubGroups() override;
269 
274 
276 
277  virtual void computeHydrostaticEquilibrium( DomainPartition & domain ) { GEOS_UNUSED_VAR( domain ); }
278 
279  void initializePorosityAndPermeability( MeshLevel & mesh, string_array const & regionNames );
280 
281  void initializeHydraulicAperture( MeshLevel & mesh, string_array const & regionNames );
282 
283  void saveInitialPressureAndTemperature( MeshLevel & mesh, string_array const & regionNames );
284 
285  virtual void setConstitutiveNamesCallSuper( ElementSubRegionBase & subRegion ) const override;
286 
289 
292 
295 
298 
301 
304 
307 
310 
313  real64 m_maxSequentialPresChange;
314 
317  real64 m_maxSequentialTempChange;
318 
322  class BCMessage
323  {
324 public:
325  static string pressureConflict( string_view regionName, string_view subRegionName,
326  string_view setName, string_view fieldName );
327 
328  static string temperatureConflict( string_view regionName, string_view subRegionName,
329  string_view setName, string_view fieldName );
330 
331  static string missingPressure( string_view regionName, string_view subRegionName,
332  string_view setName, string_view fieldName );
333 
334  static string missingTemperature( string_view regionName, string_view subRegionName,
335  string_view setName, string_view fieldName );
336 
337  static string conflictingComposition( int comp, string_view componentName,
338  string_view regionName, string_view subRegionName,
339  string_view setName, string_view fieldName );
340 
341  static string invalidComponentIndex( int comp,
342  string_view fsName, string_view fieldName );
343 
344  static string notAppliedOnRegion( int componentIndex, string_view componentName,
345  string_view regionName, string_view subRegionName,
346  string_view setName, string_view fieldName );
347 private:
348  static string generateMessage( string_view baseMessage,
349  string_view fieldName, string_view setName );
350  };
351 
352 private:
353  virtual void setConstitutiveNames( ElementSubRegionBase & subRegion ) const override;
354 
355  // flag to determine whether or not to apply lagging update for the fracture stencil weights
356  integer m_isLaggingFractureStencilWeightsUpdate;
357 
358 };
359 
360 
361 }
362 
363 #endif //GEOS_PHYSICSSOLVERS_FINITEVOLUME_FLOWSOLVERBASE_HPP_
#define GEOS_UNUSED_VAR(...)
Mark an unused variable and silence compiler warnings.
#define GEOS_ERROR(...)
Raise a hard error and terminate the program.
Definition: Logger.hpp:225
Enumerates the Units that are in use in GEOS and regroups useful conversion and formatting functions.
Unit
Enumerator of available unit types for given physical scales. Units are in SI by default.
Definition: Units.hpp:59
Provides management of the boundary stencil points (stencils used to prescribe boundary conditions on...
The DoFManager is responsible for allocating global dofs, constructing sparsity patterns,...
Definition: DofManager.hpp:45
Partition of the decomposed physical domain. It also manages the connexion information to its neighbo...
typename ElementViewAccessor< VIEWTYPE >::NestedViewTypeConst ElementViewConst
The ElementViewAccessor at the ElementRegionManager level is the type resulting from ElementViewAcces...
Class used for displaying boundary warning message.
void computeSourceFluxSizeScalingFactor(real64 const &time, real64 const &dt, DomainPartition &domain, stdMap< string, localIndex > const &bcNameToBcId, arrayView1d< globalIndex > const &bcAllSetsSize) const
For each source flux boundary condition, loop over all the target cells and sum the owned cells.
virtual void saveSequentialIterationState(DomainPartition &domain) override
Utility function to save the iteration state (useful for sequential simulations)
virtual void initializePostInitialConditionsPreSubGroups() override
Called by InitializePostInitialConditions() prior to initializing sub-Groups.
bool m_keepVariablesConstantDuringInitStep
flag to freeze the initial state during initialization in coupled problems
virtual void validatePoreVolumes(DomainPartition const &domain) const
Helper function to compute/report the elements with small pore volumes.
void findMinMaxElevationInEquilibriumTarget(DomainPartition &domain, stdMap< string, localIndex > const &equilNameToEquilId, arrayView1d< real64 > const &maxElevation, arrayView1d< real64 > const &minElevation) const
For each equilibrium initial condition, loop over all the target cells and compute the min/max elevat...
virtual units::Unit getMassUnit() const
virtual void registerDataOnMesh(Group &MeshBodies) override
Register wrappers that contain data on the mesh objects.
FlowSolverBase(FlowSolverBase &&)=default
default move constructor
FlowSolverBase & operator=(FlowSolverBase const &)=delete
deleted assignment operator
real64 m_sequentialPresChange
maximum (absolute) pressure change in a sequential iteration
void updateStencilWeights(DomainPartition &domain) const
Update the stencil weights by adding the contribution of the hydraulic aperture after the aperture is...
bool m_isFixedStressPoromechanicsUpdate
enable the fixed stress poromechanics update of porosity
void setKeepVariablesConstantDuringInitStep(bool const keepVariablesConstantDuringInitStep)
Utility function to keep the flow variables during a time step (used in poromechanics simulations)
FlowSolverBase & operator=(FlowSolverBase &&)=delete
deleted move operator
bool m_isJumpStabilized
enable pressure jump stabilzation for fixed-stress poromechanics
void applyFieldValue(real64 const &time_n, real64 const &dt, MeshLevel &mesh, char const logMessage[], string const fieldKey, string const boundaryFieldKey) const
Utility function that encapsulates the call to FieldSpecificationImpl::applyFieldValue in BC applicat...
virtual void assembleHydrofracFluxTerms(real64 const time_n, real64 const dt, DomainPartition const &domain, DofManager const &dofManager, CRSMatrixView< real64, globalIndex const > const &localMatrix, arrayView1d< real64 > const &localRhs, CRSMatrixView< real64, localIndex const > const &dR_dAper, stdMap< string, localIndex > const *const dR_dAperOffsets)
assembles the flux terms for all cells for the hydrofracture case
void prepareStencilWeights(DomainPartition &domain) const
Prepare the stencil weights by removing the contribution of the hydraulic aperture before the apertur...
FlowSolverBase(const string &name, Group *const parent)
main constructor for Group Objects
virtual void setConstitutiveNamesCallSuper(ElementSubRegionBase &subRegion) const override
This function sets constitutive name fields on an ElementSubRegionBase, and calls the base function i...
FlowSolverBase(FlowSolverBase const &)=delete
deleted copy constructor
virtual void initializePreSubGroups() override
Called by Initialize() prior to initializing sub-Groups.
static string coupledSolverAttributePrefix()
String used to form the solverName used to register single-physics solvers in CoupledSolver.
integer m_allowNegativePressure
flag if negative pressure is allowed
integer m_isThermal
flag to determine whether or not this is a thermal simulation
real64 m_maxAbsolutePresChange
maximum (absolute) pressure change in a Newton iteration
virtual bool checkSequentialSolutionIncrements(DomainPartition &domain) const override
Check if the solution increments are ok to use.
void allowNegativePressure()
Function to activate the flag allowing negative pressure.
real64 m_sequentialTempChange
maximum (absolute) temperature change in a sequential iteration
FlowSolverBase()=delete
deleted default constructor
void applyDeltaVolume(ElementSubRegionBase &subRegion) const
Apply the delta volume to the element volume and reset delta volume to zero @detail This is needed fo...
integer m_numDofPerCell
the number of Degrees of Freedom per cell
void checkDiscretizationName() const
Checks the validity of the discretization name for the FiniteVolume method (errors if issues are dete...
virtual void saveAquiferConvergedState(real64 const &time, real64 const &dt, DomainPartition &domain)
Increment the cumulative flux from each aquifer.
virtual void saveConvergedState(ElementSubRegionBase &subRegion) const
Utility function to save the converged state.
real64 m_inputTemperature
the input temperature
Class facilitating the representation of a multi-level discretization of a MeshBody.
Definition: MeshLevel.hpp:42
Base class for all physics solvers.
ArrayView< T, 1 > arrayView1d
Alias for 1D array view.
Definition: DataTypes.hpp:179
stdVector< string > string_array
A 1-dimensional array of geos::string types.
Definition: DataTypes.hpp:361
double real64
64-bit floating point type.
Definition: DataTypes.hpp:98
LvArray::CRSMatrixView< T, COL_INDEX, INDEX_TYPE const, LvArray::ChaiBuffer > CRSMatrixView
Alias for CRS Matrix View.
Definition: DataTypes.hpp:309
internal::StdMapWrapper< std::map< Key, T, Compare, Allocator >, USE_STD_CONTAINER_BOUNDS_CHECKING > stdMap
int integer
Signed integer type.
Definition: DataTypes.hpp:81
std::string_view string_view
String type.
Definition: DataTypes.hpp:93
Structure to hold scoped key names.